Blogging, Short Papers, and Demos/Tutorials
Sorted by Year, Reverse Chronological Order
2019
Dvoretskii, S. and Alicea, B. Modeling Neural Development with Braitenberg Vehicles. INCF Neuroinformatics Conference, University of Warsaw, Poland.
2018
Alicea, B., Portegys, T.E. Data Repository for "Morphogenetic processes as data: Quantitative structure in the Drosophila eye imaginal disc". Figshare, doi:10.17605/OSF.IO/DAUJM.
Weber, R., Alicea, B., Huskey, R., and Mathiak, K. Data from: "Network Dynamics of Attention During a Naturalistic Behavioral Paradigm". Figshare, doi:10.17605/OSF.IO/435KR
Alicea, B., Gordon, R., and Banerjee, A. Embryo networks and connectomes in Caenorhabditis elegans. Figshare, doi:10.17605/OSF.IO/Q9JVB.
2016
Alicea, B. and Cibelli, J. Secondary data and results of analyses for "Comparing indirect-derived ES cells and directly-derived iPS cells". Figshare, doi:10.6084/m9.figshare.3972483.
Reproductive Capacity, Developmental Plasticity, and Evolution in C. elegans. Figshare, doi:10.6084/m9.figshare.3122113.
Data Reuse as a Prisoner's Dilemma: the social capital of open science. bioRxiv, doi:10.1101/093518.
Playing Games with Ideas: when epistemology pays off. Journal of Brief Ideas, doi:10.5281/zenodo.167647.
2015
Alicea, B. Data from: "Mechanism Alteration Reveals Patterns of Cellular Information Processing". Figshare, doi:10.6084/m9.figshare.689894.
Alicea, B., Suhr, S.T., and Keaton, S. Data from: Fibroblast Reprogramming Diversity. Figshare, doi:10.6084/m9.figshare.1320528.
Alicea, B. Physical Intelligence Experiments. Figshare, doi:10.6084/m9.figshare.1320529.
2014
Carnival of Evolution #70: the game of evolution. April 1, Synthetic Daisies Blog, doi:10. 6084/m9.figshare.900957.
2013
A Semi-automated Peer-review System. arXiv:1311.2504.
Game Theory of Shutting Things Down. October 15, Synthetic Daisies Blog.
Carnival of Evolution #58: Visions of the Evolutionary Future. April 1, Synthetic Daisies Blog.
Independent features of quantified thermocycling reactions. Figshare, doi:10.6084/m9.figshare.649432.
Genomic Signal Processing: one scientist's quest. Figshare, doi:10.6084/m9.figshare.155705.
2012
Carnival of Evolution #46: the Tree (Structures) of Life. April 1, Synthetic Daisies Blog.
Dvoretskii, S. and Alicea, B. Modeling Neural Development with Braitenberg Vehicles. INCF Neuroinformatics Conference, University of Warsaw, Poland.
2018
Alicea, B., Portegys, T.E. Data Repository for "Morphogenetic processes as data: Quantitative structure in the Drosophila eye imaginal disc". Figshare, doi:10.17605/OSF.IO/DAUJM.
Weber, R., Alicea, B., Huskey, R., and Mathiak, K. Data from: "Network Dynamics of Attention During a Naturalistic Behavioral Paradigm". Figshare, doi:10.17605/OSF.IO/435KR
Alicea, B., Gordon, R., and Banerjee, A. Embryo networks and connectomes in Caenorhabditis elegans. Figshare, doi:10.17605/OSF.IO/Q9JVB.
2016
Alicea, B. and Cibelli, J. Secondary data and results of analyses for "Comparing indirect-derived ES cells and directly-derived iPS cells". Figshare, doi:10.6084/m9.figshare.3972483.
Reproductive Capacity, Developmental Plasticity, and Evolution in C. elegans. Figshare, doi:10.6084/m9.figshare.3122113.
Data Reuse as a Prisoner's Dilemma: the social capital of open science. bioRxiv, doi:10.1101/093518.
Playing Games with Ideas: when epistemology pays off. Journal of Brief Ideas, doi:10.5281/zenodo.167647.
2015
Alicea, B. Data from: "Mechanism Alteration Reveals Patterns of Cellular Information Processing". Figshare, doi:10.6084/m9.figshare.689894.
Alicea, B., Suhr, S.T., and Keaton, S. Data from: Fibroblast Reprogramming Diversity. Figshare, doi:10.6084/m9.figshare.1320528.
Alicea, B. Physical Intelligence Experiments. Figshare, doi:10.6084/m9.figshare.1320529.
2014
Carnival of Evolution #70: the game of evolution. April 1, Synthetic Daisies Blog, doi:10. 6084/m9.figshare.900957.
2013
A Semi-automated Peer-review System. arXiv:1311.2504.
Game Theory of Shutting Things Down. October 15, Synthetic Daisies Blog.
Carnival of Evolution #58: Visions of the Evolutionary Future. April 1, Synthetic Daisies Blog.
Independent features of quantified thermocycling reactions. Figshare, doi:10.6084/m9.figshare.649432.
Genomic Signal Processing: one scientist's quest. Figshare, doi:10.6084/m9.figshare.155705.
2012
Carnival of Evolution #46: the Tree (Structures) of Life. April 1, Synthetic Daisies Blog.
